Download

Source Code

JOA is an open source code project. You can browse and download JOA source code from github and run it as a Java project.

Executable Jar

You can download JOA executable jar joa.jar and run it.

Sample BED Files

You can download sample BED files and run JOA with them.

Explanation	Sample BED Files (tar.gz)
Download sample BED files	simulated_data.tar.gz fAdrenal-DS12528.hotspot.twopass.fdr0.05.merge.bed fAdrenal-DS15123.hotspot.twopass.fdr0.05.merge.bed fAdrenal-DS17319.hg19.hotspot.twopass.fdr0.05.merge.bed fAdrenal-DS17677.hg19.hotspot.twopass.fdr0.05.merge.bed fAdrenal-DS20343.hg19.hotspot.twopass.fdr0.05.merge.bed